Similarity Search
Library/Program:
deduced Protein sequences/BLASTP
deduced DNA sequences/BLASTN
overall DNA sequence(s)/TBLASTN
overall DNA sequence(s)/BLASTN
Library
available
Mesorhizobium loti
MAFF303099
1,2,3,4
Bradyrhizobium japonicum
USDA110
1,2,3,4
Sinorhizobium meliloti
1021
1,2,3,4
Rhizobium etli
CFN42
1,2,3,4
Rhizobium leguminosarum
biovar
viciae
strain 3841
1,2,3,4
Rhizobium
sp. NGR234
1,2,3,4
M.loti
R7A symbiosis island
1,2,3,4
Rhodopseudomonas palustris
CGA009 (purple bacterium)
1,2,3,4
Bradyrhizobium
sp. BTAi1
1,2,3,4
Bradyrhizobium
sp. ORS278
1,2,3,4
Azorhizobium caulinodans
ORS 571
1,2,3,4
sequences collected from Genbank
1,2
rhizobial peptides in Swissprot
1
* [Genbank_rhizo]
This database is compiled from sequences of bacteria to be of 3 Family (Bradyrhizobiaceae, Phyllobacteriaceae, Rhizobiaceae) and of 5 Genus (Methylobacterium, Azorhizobium, Devosia, Burkholderia, Ralstonia), containing the leguminous bacteria.
Sequence:
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Expect (E-value):
The statistical significance threshold for reporting matches against database sequences. Lower EXPECT thresholds are more stringent. (Example for higher stringency: 1E-5 or 1E-100, lower stringency: 100 or 1000)
RhizoBase
